Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAGKMKLFSVTSERPLATKIADYLDIPLCEVELQKFSDGEVKINIEESIRGTNAYVVQSMNSNVNERLMELLIMVDALKRASVHSINIIMPYYGYARQDRKARSREPITAKLMANLIQRAGANRLITVDLHAAQIQGFFNIPIDHLSAIPLIGDYLIENYGE-KDVVVVAPDHSGVVRARRIADRLNAPIAILNR-KPRPHEDEIMSVIGDVKGKVAIVVDDIIDTGVRATTSADILLEKGAVEVIACATHSVMAGNATERLQNSNIKEVITSDSIDLPED---KQFDKLTTISIGRILGRAIEGVQENRSLHPLF
2HCR Chain:A ((4-313))----IKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCGEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSIADRLNVDFALIHKER------DRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACFEAVVVTNTI--PQEDKMKHCSKIQVIDISMILAEAIRRTHNGESVSYLF


General information:
TITO was launched using:
RESULT:

Template: 2HCR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -271929 for 2551 contacts (-106.6/contact) +
2D Compatibility (PS) -33068 + (NN) -14822 + (LL) 236
1D Compatibility (HY) -27600 + (ID) 6500
Total energy: -353683.0 ( -138.64 by residue)
QMean score : 0.607

(partial model without unconserved sides chains):
PDB file : Tito_2HCR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HCR-query.scw
PDB file : Tito_Scwrl_2HCR.pdb: