Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LIIDVLQHVPHEGPGLIANWARENQHQLKIHSLFEENAHVPNDSDFLIVLGGPMGINDTAEFPWLKDERKLIKRLSEQHKPVFGVCLGAQ-------------QIAATFGSEITVNKEKEV-----GWFPVKRTSDKLLFFPKSLNVFHWHQDTFALPTGSTRLFASE-GCLNQAFLYGENIIGLQFHFEM-EKAGIETILRIDEAFITPGKYVQSVEVMREKDVPEDNKQMLEAILDYLINPKTI |
4GUD Chain:A ((48-197)) | ------------------------------------------------------GVGTASEAMKNLTERDLIELVKRVEKPLLGICLGMQLLGKLSEEKDEIVQCLGLVDGEVRLLQTGDLPLPHMGWNTVQVKEGHPLFNGIEPDAYFYFVHSFAMPVGDYTIAQCEYGQPFSAAIQAGNYYGVQFHPERSSKAGARLI---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GUD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52399 for 860 contacts (-60.9/contact) +
2D Compatibility (PS) -13180 + (NN) 1078 + (LL) 7136
1D Compatibility (HY) -5200 + (ID) 1850
Total energy: -64415.0 ( -74.90 by residue)
QMean score : 0.260
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