Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKITNNLFADIGFLFFILLCFITIGFMINTPDEYLRNIILLNITFLLVIITYFTNLTLGLILNVLYIFIYATYIIYEIVANQIAYGFGSYFWLIITPLFTVASAMFTRNTSRLQEENTKIKQQNLYLGTIDQETLLKNIVSFQNDERIFSSISRRYDLPLSLMVIKVRHWRELKRFQSEDEMRLALQDISAILETCIRTSDVLYLLDKDDATWGLLL-LTDEPGGKLVADRIKSRIAEANTEEFAAKYRVKLELRIGTSQFDSEKVKTPLDFIDLATKELEYDV |
3TVK Chain:A ((4-149)) | --------------------------------------------------------------------------------------------------------------------------------SNMDVLTGLPGRRVLDESFDHQLRNA--EPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGG--EEFIIIVKAANDEEACRAGVRICQLVDNHAITH--SEGHINITVTAGVSRAFP--EEPLDVVIGRADRAMY--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74398 for 1074 contacts (-69.3/contact) +
2D Compatibility (PS) -15168 + (NN) 521 + (LL) 13212
1D Compatibility (HY) -4800 + (ID) 850
Total energy: -81483.0 ( -75.87 by residue)
QMean score : 0.434
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