Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQKEMLNFDYYNPTHIIFGKNRFNELNE----------VIPQDKKVLILYGGGSVERFGTLDKVKAALKSREVGEFGGIEANPTYETLIKAIQLVKEENYDFLLAVGGGSVIDGTKFVAAGALF-DGEPMDIFGSGIGEKRPITKALPFGTVLTLPATGSEMNSGGVITFVEKKAKLGFGSAYTYPVFSLLDPELTYTLPKRQLANGIMDAYVHVMEQYMTYPVGALLQDRYAESLLQTLIEIGPDVIKEDNHDYNTRATFMWSATNALNGTLSRGVPQDWAS----HSLGHEITALYGIDHARTLAIVLPSLLNVRRSEKHDKLVQYAERVWGITSG-SDEEKIDAAILKTREFFESLGAGTRFSDYGLGEEVVDLLVDQLDRHGLTNISERGDQTLEVSRQIYTNAL |
| 4FR2 Chain:A ((17-376)) | -------YDFLMPSVNFFGPGVISKIGERAKMLGMKKPVIVTDKFLENLKNGAVAQTLASLKK-----SGVDYVVYNGVEPNPKIHNIKEVKTLYEKEDADSIITVGGGSAHDTGK--GAGIIMTNGDDITKLAGIETLKNPLP---PLIAVNTTAGTGSELTRHAVITNEETHLKFVVVSWRNIPLVSFNDPTLMLDIPKGLTAATGMDAFVQAVEPYVSVDHNPITDSQCIQAI--KLIESSLREAVANGHNLQAR-------TKMVEAEMLAGMAFNNANLGYVHAMAHQLGGQYDAPHGVCCALLLPYAEEYNLIADPERFAELARIMGENTDGLSTRDAAELSIKAMKQLSEDVGIPHSIKDIGAKPEDFDLMAENALKDG----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FR2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111363 for 3095 contacts (-36.0/contact) +
2D Compatibility (PS) -36912 + (NN) -10151 + (LL) 5036
1D Compatibility (HY) -14000 + (ID) 4350
Total energy: -171740.0 ( -55.49 by residue)
QMean score : 0.402
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