Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVIIDYDTGNTKSISKALDFIGLQNKI--SSDATEISQADGVILPGVGAYPEAMKELTRRGLNKTLKEIAAGGKPILGVCLGMQLLLESSNEHSFTNGLGLIPGHVEKLPEDPEFAVPHMGWNQLQIKRATPLTKQLDG----EYVYYVHSYYA--NCPEEYIIATSGYSI--------EVPGMINKGNIYGAQFHPEKSGQIGLEILKGFKEVTYSCKSSQQ
1OX4 Chain:A ((6-230))
VVHVIDVESGNLQSLTNAIEHLGYEVQLVKSPKDFNISGTSRLILPGVGNYGHFVDNLFNRGFEKPIREYIESGKPIMGICVGLQALFAGSVESPKSTGLNYIDFKLSRF-DDSEKPVPEIGWNS-----CIPSENLFFGLDPYKRYYFVHSFAAILNSEKKKNLENDGWKIAKAKYGSEEFIAAVNKNNIFATQFHPEKSGKAGLNVIENF------------
General information:
TITO was launched using:
RESULT:
Template:
1OX4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96458 for 1484 contacts (-65.0/contact) +
2D Compatibility (PS) -21030 + (NN) -9577 + (LL) 1304
1D Compatibility (HY) -16800 + (ID) 3450
Total energy: -146011.0 ( -98.39 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_1OX4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OX4-query.scw
PDB file :
Tito_Scwrl_1OX4.pdb
: