Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VAKRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEANEQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAENLGTKMTTKYSDEGLLITIRDDILFQSGSAE-LSAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARAVNFMEAIIQENSEVNPGEFSARGYGEFRPVAKNDIAANREKNRRVEIMVRPINRDTLDEDE |
| 3S0H Chain:A ((29-147)) | ----------------------------------------------------------------------------------------------------------------------------------------------DQGSILKLPSNLLFENATSDAINQDMMLYIERIAKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYG--VNPNQLSFSSYGSTNPIAPNDSLENRMKNNRVEIF------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S0H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9277 for 854 contacts (-10.9/contact) +
2D Compatibility (PS) -12821 + (NN) -8388 + (LL) 11848
1D Compatibility (HY) -8800 + (ID) 1800
Total energy: -29238.0 ( -34.24 by residue)
QMean score : 0.477
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