Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLNENIKAIRKSKGLSQEEIAIKLNVVRQTISKWEQGLSVPDSDMLISISEVLETPVSTLLGETVMVSKVDDVKAISEKLEIINLQFAQRKTARRKMLYWLFVSLCAVIAIISAVFIILNSPYLGWDYSDPETSVIGVAFHTFEWLFVRLAPIILIGGVVGIFLTRKNV
2LYP Chain:A ((1-61))
MIINNLKLIREKKKISQSELAALLEVSRQTINGIEKNKYNPSLQLALKIAYYLNTPLEDIF------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2LYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31733 for 431 contacts (-73.6/contact) +
2D Compatibility (PS) -6518 + (NN) -1527 + (LL) 10132
1D Compatibility (HY) -5200 + (ID) 1100
Total energy: -35946.0 ( -83.40 by residue)
QMean score : 0.679
(partial model without unconserved sides chains):
PDB file :
Tito_2LYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LYP-query.scw
PDB file :
Tito_Scwrl_2LYP.pdb
: