Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFDDSKPIYKQIVHYIHTEIVTGTYEAGDKLLSVRELATKLEVNPTTIQRAYAELEETEIIYTVRGTGKYLTEDKRRI--EQLENDIAKQLTENFISEMSKLGINKEKIIAWVKKVEEVEVNVSGK
2EK5 Chain:A ((4-115))
-------PLYKQIASLIEDSIVDGTLSIDQRVPSTNELAAFHRINPATARNGLTLLVEAGILYKKRGIGMFVSAQAPALIRERRDAAFAATYVAPLIDESIHLGFTRARIHALLDQVAE--------
General information:
TITO was launched using:
RESULT:
Template:
2EK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37204 for 666 contacts (-55.9/contact) +
2D Compatibility (PS) -11452 + (NN) -814 + (LL) 792
1D Compatibility (HY) -2400 + (ID) 1350
Total energy: -52428.0 ( -78.72 by residue)
QMean score : 0.494
(partial model without unconserved sides chains):
PDB file :
Tito_2EK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EK5-query.scw
PDB file :
Tito_Scwrl_2EK5.pdb
: