Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVLNIEGAKLSYQKVGQGPILIFIPGANGTGDIFLPLAEQLKTSFSVVMVDRRGYGDSELTAAIPERASHAYDDYRVTRDAADIAALAKALSDVPVYILGSSSGSIVAMHVLKNHPEVVKK-IAFHEPPINTFLPDSEMWQEANEKIVQTALTKNMAEAMQLFGETLHIAPIDAESMSKPAVTIDEVTKDSTTQQMKYWFTYEIRQYTSSNISLDDFKPYVHQITLLNGTDSKGSFPQDVNAFIAKQLGLTIVDIPGGHLGYIQKPAGFAKVLLSIWG |
4O08 Chain:A ((40-225)) | ---INVNGVNLHYISKGQGELMLFLHGFPDFSHIWRHQIDEFSNDFHTVALDLRGYNLSEKPSGL--------ESYEIDVLVEDIRQVIEGLGYSSCTLVVHDWGAGIGWTFAYRYPEYVQKLIAFNGPHPYTFM--RELRTNKNQQKASEYMKWFQKQEVQDYMERDNFSGL-RKLVIDPGVKKGYLTADDVQAYMNSW------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O08.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82172 for 1369 contacts (-60.0/contact) +
2D Compatibility (PS) -19486 + (NN) -5646 + (LL) 4856
1D Compatibility (HY) -10400 + (ID) 2150
Total energy: -114998.0 ( -84.00 by residue)
QMean score : 0.374
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