Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VIYLDNEDVLDQAYNFAMEEYALRSLDENETYFMFYRMKPTIIVGKNQNTLEEINHPFVKDHHIDVLRRLSGGGAVYNDEGNISFSMI-TKDDGNSFQNFAKFTEPVIRALRKLGVNAELSGRNDIEV----------NGKKISGNAQFATKGRLYSHGTLLFDVDLSMLEKALQVDPEKYLSKGVKSVRSRVTTIREHLAEDIDILTFKQILLESIFETK--DIPRYTFTEADKQGIEKLRTERYRNWDWTYGKSPKATIKRKKRFPAGTIEFQVSLEKGQVKEATIYGDFFGTEDVAELAEKIIGCRFERKSIQNAWQEINAKDYFGGIEKEAILDMLFE |
| 2ARU Chain:A ((38-255)) | ----------------------------------FYRHDRSVIIGYFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRSSDDMDITSMFRTMNEAVVNSLRILGLDARPGELNDVSIPVNKKTDIMAGEKKIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVLKVP----------STRERVANVTDFV--DVSIDEVRNALIRGFSETLHIDFREDTITEKEESLARELFDKKYSTEEWNMG---------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ARU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75894 for 1367 contacts (-55.5/contact) +
2D Compatibility (PS) -20731 + (NN) -7720 + (LL) 10356
1D Compatibility (HY) -14400 + (ID) 3300
Total energy: -111689.0 ( -81.70 by residue)
QMean score : 0.555
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