Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LVIENRDFIQISTEK----IKKEINNQKLVEMYKRCMENTLDTTIKIRDSGL----TFILTGDIPAMWLRDSVCQVRPFLIFAKENEEIESMLIGLSKEQVSLVEIDPYANAFNETPNGAGH-QADKTEMHPQVWERKYEIDSLCYPIQLAYLIWKITGRTEQFDAAFFKMLQTIFALWEVEQHHETKSPYRFERLDCVPSDTLKRNGLGTETAYTGMLWSGFRPSDDACEYGYLIPSNMFAVVVLGYAKEIIEAFYPSEIETIKQAATLQNDIQLGIEKFGTYNHPTFGEIFAFEVDGLGNQLLMDDANVPSLLSMPIIEYLEKESPIYQNTRKFILSKSNPYYFEGKLAKGIGSPHTPAGYIWPIGLAIQGLTASDKSEKLEILQMLLRTDAGTGLMHESFHPDYPEDFTREWFSWANMMFCELVLDVAGFRMANVLKN |
| 3P2C Chain:A ((24-448)) | --ISNRLFRSNAVEKEILRVQKLLKNAKLAWMFTNCFPNTLDTTVHFRKGSDGKPDTFVYTGDIHAMWLRDSGAQVWPYVQLANSDPELKEMLAGVILRQFKCINIDPYANAFNDGAIPDGHWMSDLTDMKPELHERKWEIDSLCYPLRLAYHYWKTTGDASIFNEEWIQAITNVLKTFKEQQRKDGVGPYKFQRKTERALDTVSNDGLGAPVKPVGLIVSSFRPSDDATTLQFLVPSNFFAVSSLRKAAEILEKVN-KKTALSKECKDLAQEVETALKKYAVYNHPKYGKIYAFEVDGFGNHHLMDDANVPSLLAMPYLGDVNVNDPIYQNTRRFVWSEDNPYFFKGKAGEGIGGPHIGYDMVWPMSIMMKAFTSQNDAEIKTCIKMLMDTDAGTGFMHESFHKDNPKKFTRAWFAWQNTLFGELIL------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P2C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -229053 for 3788 contacts (-60.5/contact) +
2D Compatibility (PS) -43987 + (NN) -24909 + (LL) 1172
1D Compatibility (HY) -36400 + (ID) 9350
Total energy: -342527.0 ( -90.42 by residue)
QMean score : 0.514
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