Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKWSEYANLAQLSLEKFYLADTKEQFLNNFYPTENPEEDNKVFNYWWLAHLVEVRLDAYLRTKK---QADLEIA-ENTYMHNKNRNGETLIHD-FYDDMLWNALAAYRLYKETGKPIYLEDAQLVWQDLVDTGWN-NIMGGGFAWRRPQMYYKNTPVNAPFIILSCWLYNELNETKYLEWAMKTYEWQTKVLVREDGFVEDGINRLEDGAIDYEWKFTYNQGVYIGANLELYRITKEAKYLDTANKTADTSLKELTE-DGIFKDEGSGGDEGLFKGIFYRYFTDLIEETADKTYRDFVLNSCQILVESAKVDGYLLMGMNWKEKPSGKIPYSAELSGMIALEMAAKLER |
| 5AGD Chain:A ((58-307)) | -------------------------------------------DFWVEAELWELVMDAYQHTSDPALKAELKTQIDDVYDGTVAKYGQDWTNNPFNDNIMWWAMGSARAYQITGNPRYLEAARDHFDFVYDTQWDEEFANGGIWWLNSDHNTKNACINFPAAQAALYLYDITKDEHYLNAATKIFRWGKTMLTDGNGKVFDRI-EIEHGAVPD--ATHYNQGTYIGSAVGLYKATGNAVYLDDAVKAAKFTKNHLVDSNGVLNYEGPNGDLKGGKTILMRNLAHL-QKTLDET-------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5AGD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93334 for 2038 contacts (-45.8/contact) +
2D Compatibility (PS) -25204 + (NN) -9992 + (LL) 7724
1D Compatibility (HY) -10000 + (ID) 4000
Total energy: -134806.0 ( -66.15 by residue)
QMean score : 0.434
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