Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKLCTISDSQALLEVSYKTFDETFRAQNKPENMDAYLKTNFTAKKLSDELKNPHS----YFYFVFHQEAIAGYLKLNIGDAQTEEIAGNTIEIERIYVLKSFQKKGLGKELFNQAIEIAKEVDAKKIWLGVWEKNKNAIQFYAKLGFIKNGQHDFFMGDDCQTDIIMIKDL
3K9U Chain:A ((5-143))
-IRKLSIEDLETLIEVARESWKWTYAGIYSEEYIESWIREKYSKEKLLNEIVRSQSNLDILFLGAFADSTLIGFIEL--------KIIANKAELLRLYLKPEYTHKKIGKTLLLEAEKIMKKKGILECRLYVHRQNSVGFSFYYKNGF------------------------
General information:
TITO was launched using:
RESULT:
Template:
3K9U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94991 for 928 contacts (-102.4/contact) +
2D Compatibility (PS) -14611 + (NN) -3777 + (LL) 1892
1D Compatibility (HY) -11200 + (ID) 1800
Total energy: -124487.0 ( -134.15 by residue)
QMean score : 0.489
(partial model without unconserved sides chains):
PDB file :
Tito_3K9U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3K9U-query.scw
PDB file :
Tito_Scwrl_3K9U.pdb
: