Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VSKNVKKIVITLFALIMTVGLASGFIAPIKASADTNNFTVKVEYVDADGAEIAPSDILTDYHYVSTPKDIPGYKLREIPHNATGNITDTGIIVRYIYDKTIDVRYVDETGKDLLPVVEIINSEAAVLETISDYTFVKKDISIDGLHIIFRYKKNISTIPDFGKPNQVTVNYLDENKTPIAPSLYLSGLFNEAYNVPMKKIKGYTLLKYDSEILGVFTESPQTINIIYQKKAPEQAPSMEPLPDPTVPESPQVEKSKIKKSKIETTEKRTTSKVKIAPKALKLTKVEQKKQETKDSLPKTGDSSVNLLITCLGIIAISCGVYLLVQQSQKRRRKE |
| 2KT7 Chain:A ((38-101)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------NFTVKVEYVDADGAEIAPSDTLT---DYHYVSTPKDIPGYKLREIPHNATGNITDTGIIVRYIYDKI-------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KT7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20499 for 407 contacts (-50.4/contact) +
2D Compatibility (PS) -6849 + (NN) -1991 + (LL) 17964
1D Compatibility (HY) -3200 + (ID) 1000
Total energy: -15575.0 ( -38.27 by residue)
QMean score : 0.456
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