Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNDYNHYFHFPREEWRKLEVSKDQILTAEELEEIRGLNDRISLQDISEIYLPLIKLIAIQYHEAIFIHGEKMEYLKKKESR----APFIIALAGSVAVGKSTTARVFKLMLDRWFSKTRQVELVTTDGFLYPNKVLEERGIMDKKGFPESYDRDRFAKFLTDLKANKEDVEIPLYSHFTYDVLDET-RVIHNPDIVIIEGINVLQADQHESLFPSDFFDFSVYMDANEADIKKWYLERFFMLRETAFQDESSYFHPYTKISKQEAETFALGVWDTINGVNLKENIEKTKYRADLVLQKGTDHLISDIYLRK |
2GEU Chain:A ((5-311)) | -SEPSPYVEFDRRQWRALRMSTPLALTEEELVGLRGLGEQIDLLEVEEVYLPLARLIHLQVAARQRLFAATAEFLGEP---PDRPVPFIIGVAGSVAVGKSTTARVLQALLARWDHHPR-VDLVTTDGFLYPNAELQRRNLMHRKGFPESYNRRALMRFVTSVKSGSDYACAPVYSHLHYDIIPGAEQVVRHPDILILEGLNVLQTG--PTLMVSDLFDFSLYVDARIEDIEQWYVSRFLAMRTTAFADPESHFHHYAAFSDSQAVVAAREIWRTINRPNLVENILPTRPRATLVLRKDADHSINRLRLRK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GEU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159649 for 2337 contacts (-68.3/contact) +
2D Compatibility (PS) -32335 + (NN) -13836 + (LL) 668
1D Compatibility (HY) -30400 + (ID) 7100
Total energy: -242652.0 ( -103.83 by residue)
QMean score : 0.491
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