Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKDIDWSNLGFSYIKTDKRY-ISYWKDGEWDEGALTEDNTLHISEGSTALHYGQQCFEGLKAYRCKDGSINLFRPDRNAARIQKSCERLLMPHIPTEKFIDAVMQVVRANEEFVPPYGTGATLYLRPFVIGVGDNIGVHAAPEYIFSVFCSPVGPYFKGGMAPTNFIVS-DFDRAAPNGTGAAKVGGNYAASLLPGQAAKERNFGDCIYLDPATHTKIEEVGSANFF---GITKDDKFVTP-YSPSILPSITKYSLLYLAEHRLGLEAVEGDVYIDKLDEFKEAG------ACGTAAVITPIGGIQ-TKDDFHVFHSETEVGPVTKRLFDELCGIQFGDVEAPEGWIYKVK |
| 3HT5 Chain:A ((34-367)) | --------------YHTDHMVSIDYAEGRGWHNARVIPYGPIELDPSAIVLHYAQEVFEGLKAYRWADGSIVSFRADANAARLRSSARRLAIPELPDAVFIESLRQLIAVDKAWVPGAGGEEALYLRPFIFATEPGLGVRPATQYRYLLIASPAGAYFKGGIAPVSVWVSTEYVRACPGGTGAAKFGGNYAASLLAQAEAAENGCDQVVWLDAVERRYIEEMGGMNIFFVLGSGGSARLVTPELSGSLLPGITRDSLLQLAID-AGFAVEERRIDIDEWQKKAAAGEITEVFACGTAAVITPVARVRHGASEFRI--ADGQPGEVTMALRDTLTGIQRGTFADTHGWMARL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HT5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157618 for 2574 contacts (-61.2/contact) +
2D Compatibility (PS) -34609 + (NN) -13504 + (LL) 884
1D Compatibility (HY) -26400 + (ID) 6650
Total energy: -237897.0 ( -92.42 by residue)
QMean score : 0.419
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