Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQKTFIKVTCSILTISD--TRNLDTDTSGQLIQSALETA---GHEVISRVVVPDDVTLIKQKINELA-ANGSFCLITNGGTGIARRDVTYEALFATIQQEIPGFGEIFRMLSYEEVGSRAMVSRAFAGFSESGLLLFALPGSSNACQLAVQKLIIPELPHLIAERQK
3MCI Chain:A ((5-156))
-------KAVIGVVTISDRASKGIYEDISGKAIIDYLKDVIITPFEVEYRVI-PDERDLIEKTLIELADEKGCSLILTTGGTGPAPRDVTPEATEAVCEKMLPGFGELMRQVSLKQVPT-AILSRQTAGIRGS-CLIVNLPGKPQSIKVCLDA-VMPAIPYCI-----
General information:
TITO was launched using:
RESULT:
Template:
3MCI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100794 for 1190 contacts (-84.7/contact) +
2D Compatibility (PS) -15514 + (NN) -4370 + (LL) 1712
1D Compatibility (HY) -12400 + (ID) 2800
Total energy: -134166.0 ( -112.74 by residue)
QMean score : 0.625
(partial model without unconserved sides chains):
PDB file :
Tito_3MCI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MCI-query.scw
PDB file :
Tito_Scwrl_3MCI.pdb
: