Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEYSYPLNPDWTTEEMTIVVQFLEAIERAYEKGIDTLELKEKYRAFKQVVPAKGEEKRIGIDFEKASGYSAYKVMQLVKNATTSKIKMQP
2OY9 Chain:B ((9-78))
------ISLDWSTEEVIDVVHFFQAIEQAYDQGIAREDLLGKYRRFKEIVPSKSEEKQLFRAYEQENDVSCYQTIK--------------
General information:
TITO was launched using:
RESULT:
Template:
2OY9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19081 for 417 contacts (-45.8/contact) +
2D Compatibility (PS) -7477 + (NN) -2244 + (LL) 1420
1D Compatibility (HY) -6400 + (ID) 1500
Total energy: -35282.0 ( -84.61 by residue)
QMean score : 0.582
(partial model without unconserved sides chains):
PDB file :
Tito_2OY9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OY9-query.scw
PDB file :
Tito_Scwrl_2OY9.pdb
: