Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSILVTGANGQLGTELVQLLKEHN-------LTVTEWDKDSVDIVDKAAVKKAMLDLKPEWIIHCAAFTNVEAAEDELKNVNWEVNVDGTENISEAAEIVGAKLVYISTDYVFDGTKKEAYLPDDKTNPLNQYGIAKLAGEKVALEKNSQTYVIRTSWVFG---KYGNNFVYSML-KLAETHKELKVVNDQLGRPTYTYDLADFIRFVIEK---NPAY-GIYQFSNSGTATWFEFATEILKDKDVT---VNPCTSDEFPQKAERPKTSIMSLEKVEKLGFNIPTWQDALVRFKK |
| 4KTV Chain:E ((24-298)) | --VLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQ-PDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGTNP-PYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPIT-DSPVLGAQRPRNAQLDCSKLETLGI-------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4KTV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -113922 for 2087 contacts (-54.6/contact) +
2D Compatibility (PS) -27724 + (NN) -9582 + (LL) 1540
1D Compatibility (HY) -13600 + (ID) 4400
Total energy: -167688.0 ( -80.35 by residue)
QMean score : 0.487
|
|
|