Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIDKRLFQLVEKKSLVLLILFRVLSLGLMIGLWLVFAQQLTHYLEGQNVD-------------WLWLIGTVLVVLVGKAILTKLAEKQIYQASAELRLSMRRAVMEKAFRLGNNE-GQLPASTLTQLAVDGIEQLEIYYSRFLPQLFYCLIASLMIFGSLVGFAWQPAIVLLICMPMIPIVIMAVMKIAKRILSGYWSDYTNLGT---KFHENLSGLSILKAYDQDKYKQEEIVSDAERFRKATMSLLSMQLNSITIMDIISYSGAALGIGMSLIMFTNGTISMTGMLMFLLLSAEFFIPMRQLGSLFHVAMNGISACSKLFAYLELKEQV--YGSVELAKPLEKIEVHHLTYTYEGGKAKALQDVSVHFNKGSFSALVGKSGSGKSTFVRVLLNQLPGYQGEIVWNDVPLASLSGEAIRKQAVLVDNHGYLYANSIRENLLIGNPAANDSDLWNVLEQVSLADFVRKLPEQLNENLEEDGSNLSGGQRQRLLLARALLRQAEVYVFDEITSGVDLESEKIILLVLQELAKEKIVLFISHRLYNVLGADQVLVFDAGKLLEVASPERLQQESNYFKNYFLEEEALLKGGA |
| 4Q4J Chain:B ((26-592)) | ---RRLLGYLRPHTFTLIMVFVFVTVSSILGV-------LSPYLIGKTIDVVFVPRRFDLLPRYMLILGTIYAL---TSLLFWLQGKIMLTLSQDVVFRLRKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVT---LAGAVIMMFRVNVILSLVTLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQIFSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEEEKDDPDAVELREVRGEIEFKNVWFSYDK-KKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQGQRQLLAITRAFLANPKILILDEATCNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKHDELIQKRGFYYELFTSQYG------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q4J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -338342 for 4022 contacts (-84.1/contact) +
2D Compatibility (PS) -58905 + (NN) -26981 + (LL) 1972
1D Compatibility (HY) -43600 + (ID) 6350
Total energy: -472206.0 ( -117.41 by residue)
QMean score : 0.459
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