Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEKAVQLTEFVGTAIGDTIGLVIANVDGQLLEAMKLEKSYRSIGILGARTGAGPHIMAADEAVKATNTEVVKIELPRDTKGGAGH------GSLI-IFGGDDVSDVKRAVEVALNELDKTFGDVYGNEAGHIEL--QYTARASHALEKAFGAPVGKAFGLMVGAPAGIGVVMADTAVKSANVDVVAYSSPADGTSFSNEVILCISGDSGAVRQAVISAREIGKKLLGALGDEPKNDRPSYI |
| 3U27 Chain:C ((18-187)) | ----------------------LIPNVDSDMAKELGLPNEHRSIGILTADCDDVTY-TALDEATKKA---VVDVAYGKSFYGGAANANTKLAGEVIGILSGPTPAEVKSGLAAAVDFIENEAAFISANDDDSIAYFAHCISRTGTYLSKTAGIPEGESLAYLIAPPLEAMYAL-DVALKAADVRLVAFYGPPSETNF--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U27.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44375 for 1196 contacts (-37.1/contact) +
2D Compatibility (PS) -17080 + (NN) -5351 + (LL) 4404
1D Compatibility (HY) -10400 + (ID) 2400
Total energy: -75202.0 ( -62.88 by residue)
QMean score : 0.314
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