Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIYTKTGDKGMTRIIGGSKVSKDNIRIDAYGTLDELNSLIGYTITTLGAEPEIQA-ELEQIQQQLFDAGGDLAT--EEGKRAYKLTSE-PVAWLEDRIDIYADEPPEIEKFILPGGTQAASLLHMARTVTRRAEREIVGMLKIASSNEEVLKYVNRLSDYFFAVARVVNYRAGETDIFYKNSELVFRNKKK
2R6T Chain:A ((8-187))
-KIYTKNGDKGQTRIIG-QILYKNDPRVAAYGEVDELNSWVGYTKSLINSHTQVLSNELEEIQQLLFDCGHDLATPADDERHSFKFKQEQPTVWLEEKIDNYTQVVPA--KFILPGGTQLASALHVARTITKRAERQIVQLMREEQINQDVLIFINRLSDYFFAAARYANYLEQQPDMLYR-----------
General information:
TITO was launched using:
RESULT:
Template:
2R6T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47698 for 1320 contacts (-36.1/contact) +
2D Compatibility (PS) -18696 + (NN) -9091 + (LL) 1052
1D Compatibility (HY) -15600 + (ID) 4600
Total energy: -94633.0 ( -71.69 by residue)
QMean score : 0.456
(partial model without unconserved sides chains):
PDB file :
Tito_2R6T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R6T-query.scw
PDB file :
Tito_Scwrl_2R6T.pdb
: