Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPSIRYIVKTDVAETFEIIKAGQVGSNIVFSEVRTFDFGELATLACEKFYFRSSNRAALFVTINNFHGETEVTIISTGSSNGFFTGIDWGAAFDYMHSVVADLKRVAIREVAIEKQEEI
1KB4 Chain:A ((19-54))
-----------------------------------FHFNAMTCEGCKGFFRRSMKRKALFTC--PFNGDCRIT----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1KB4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1206 for 147 contacts (-8.2/contact) +
2D Compatibility (PS) -3762 + (NN) -1439 + (LL) 6792
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -3065.0 ( -20.85 by residue)
QMean score : -0.066
(partial model without unconserved sides chains):
PDB file :
Tito_1KB4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KB4-query.scw
PDB file :
Tito_Scwrl_1KB4.pdb
: