Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKFAQKTIYQVYPKSFYDTTGDGTGDIPGITAKLDYLQKLGIEMIWLNPFYPSPQNDNGYDIADYTAVDPLFGTMDDVTTLIKEAKKRNIGIMIDLVLNHTSTEHPWFKKAL-AGDPFYRDFYYFRPAKADGSPPTNWVSKFGGNAWEKLPDSSEYYLHLYDVTQADLDWANPNVREALFAVVNFWIDKGVEGFRLDVLNVIAKPKFLEDDFEGDGR------RFYTDGPGIHAYLKELHERTFGDKPIITVGEMSSTDIDNCIRYSNPDEKELSMVFHFHHLKVD----YPDGEKWRLADVNFENLKSIFHTWQVAMSDENGWDALFWNNHDQPRALGRFASDKPEHYYHSATLLGATIHFMRGTPFVYMGEEIGMMNPKFPTIDDYVDVETLNHFD--ILQKNGLSEQEVMEIIKERSRDNSRTPMQWDDSQNAGFTTGTPWLKVADNANEINVQTALSNKTSIFYFYQKLIALRKEHPVIQTGDYTPYLTEEDSIIAYKRSNETTSLLSIHHFGSEKKKIQLPTEFLNA--EVLLSNYERQRISSELELAPYETLTLIQ
4M8U Chain:A ((5-558))---WKEAVVYQIYPRSFYDANGDGFGDLQGVIQKLDYIKNLGADVIWLSPVFDSPQDDNGYDISDYKNMYEKFGTNEDMFQLIDEVHKRGMKIVMDLVVNHTSDEHAWFAESRKSKDNPYRDYYLWKDPKPDGSEPNNWGSIFSGSAWTYDEGTGQYYLHYFSKKQPDLNWENEAVRREVYDVMRFWMDRGVDGWRMDAIGSISKYTDFP-DYETDHSRSYIVGRYHSNGPRLHEFIQEMNREVLSHYDCMTVGEANGSDIEEAKKYTDASRQELNMIFTFEHMDIDKEQNSPNG-KWQIKPFDLIALKKTMTRWQTGLMNV-GWNTLYFENHDQPRVISRWGNDRKLR-KECAKAFATVLHGMKGTPFIYQGEEIGMVNSDMP-LEMYDDLEIKNAYRELVVENKTMSEKEFVKAVMIKGRDHARTPMQWDAGKHAGFTAGDPWIPVNSRYQDINVKESLEDQDSIFFYYQKLIQLRKQYKIMIYGDYQLLQENDPQVFSYLREYRGEKLLVVVNLSEEKALFEAPPELIHERWKVLISNYPERADLKSISLKPYEAVMGI-


General information:
TITO was launched using:
RESULT:

Template: 4M8U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -214622 for 4748 contacts (-45.2/contact) +
2D Compatibility (PS) -57692 + (NN) -34391 + (LL) 536
1D Compatibility (HY) -51600 + (ID) 10600
Total energy: -368369.0 ( -77.58 by residue)
QMean score : 0.504

(partial model without unconserved sides chains):
PDB file : Tito_4M8U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4M8U-query.scw
PDB file : Tito_Scwrl_4M8U.pdb: