Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVQLFSAFDRETIERNLQEEKFDLVIVGGGITGAGIALDATSRGMSVALVEMGDFASGTSSRSTKLVHGGLRYLQQFEIKEVADLGKERAIVYENGPHVTTPEWMMLPFHKGGNMGKTTASFGIRLYDYLAGVKKNERRKILSAKETL--AKNPFVKKDGLKGSGYYVEYRTDDARLTIEVMKKAVELGANAINYTKAEHFLYDDNKQVVGVTVTDRLSGKAYDIKGHRVINAAGPWVDKVRKLDYATNNKHL------RLTKGIHLVIDKQKFPMEQAVYFDTPDGRMVFAIP-RDKKVYVGTTDTVYDEAVINPKAL---ESDHNYVIKAINYMFPDVHITEKDIESSWAGVRPLIYEEGKDPSEISR------KDEVWFSESGLITMAGGKLTGYRKMAEKLLDDVSKTLAKETGKKYKTVQTKHLPISGGDIGGSEQLEAFLSKKAKEGNNRFGWTLEE-GREMAKRFGSNIDQLFTYAQEHKEQNETTLPNSLYAELRYSIQHEAVTTPIDFLLRRTGYLLFDMPYLLEWKDAVVDEMAKQFHWSDDVKQTYIEELNIQINDAREPADWHDR |
| 2R4J Chain:A ((27-471)) | --------------------------------------------LSVLMLEAQDLACATSSASSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPHIAFPMRFRLP-HRPHLRPAWMIRIGLFMYDHLG------KRTSLPGSTGLRFGANSVLKPE-IKRGFEYSDCWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDID--TGKKYSWQARGLVNATGPWVKQ-----FFDDGMHLPSPYGIRLIKGSHIVVPRVH-TQKQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYKG---DPKAVKIEESEINYLLNVYNTHFKK-QLSRDDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDEN--GKAPLLSVFGGKLTTYRKLAEHALEKLTPYY-QGIGPAW----TKESVLPGGAIEGDR------DDYAARLRRRYPFLTESLARHYARTYGSNSELLLGNAGTVSDLGEDFGHEFYEAELKYLVDHEWVRRADDALWRRT------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R4J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19888 for 3333 contacts (-6.0/contact) +
2D Compatibility (PS) -45718 + (NN) -16407 + (LL) 10728
1D Compatibility (HY) -24800 + (ID) 7250
Total energy: -103335.0 ( -31.00 by residue)
QMean score : 0.390
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