Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKEVLSKSKEKMEKAEQALTRQLGTIRAGRANASLLDRLSVDYYGAATPVNQMASISVPEARMLLITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAKVAVRNIRREANEELKKLEKNGDITEDDLRSYGEDVQKLTDESIKNIDSITKDKEAEILEV
4KAW Chain:X ((2-184))
-IDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSGITIDYYGAATPITQLASINVPEARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEGELLE-
General information:
TITO was launched using:
RESULT:
Template:
4KAW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47719 for 1333 contacts (-35.8/contact) +
2D Compatibility (PS) -20245 + (NN) -12503 + (LL) 400
1D Compatibility (HY) -14000 + (ID) 4650
Total energy: -98717.0 ( -74.06 by residue)
QMean score : 0.591
(partial model without unconserved sides chains):
PDB file :
Tito_4KAW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KAW-query.scw
PDB file :
Tito_Scwrl_4KAW.pdb
: