Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKSNTFLLITILVGLVFISFGCSEEKETPKKTAKEVQGVQIKTKEFQRVVGWLSKDSVLLQTKKSGVTYFEELNIYNEKKRPIFNTK----ESISEVQISPDYRNILLYSAE-----SAEKATMRIIALNDGSTVASRATKPLTTTFYWNDESPEKIMFVTYSPEWNFQIENWDYTLDQLDKIDVA----------------------SPFISWYGDNLVISNNKDKPDD-----------------------------ELGNLYLQDIRDSATKNL-------I-V---ANIMQFAVHDNV-LLTIEKN-S-DEKLLYDFRTLG-------FQNFFSYNAAREYDEL-GTFVPYFDTNFDKNTFLTFVPYKSAKIGSGAKEYKLVKIDPTNKKESTILELM-DNQPILSYETGDLVLYGYL---------FDKVIDTKTGKMYNLINTPTKSF |
| 1Z68 Chain:A ((18-394)) | -----------------------------------------------TFFPNWISGQEYLHQSA---DNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYV-Y-----QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEE-SRTGWAGGFFVSTPVFSYDAISYYKIFSDKD-------GYKHIHYIKDTVENAIQITSGKWEAINI-FRVTQDSLFYSSNEFEEYPGRRNIYRISIGSY------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z68.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46339 for 1937 contacts (-23.9/contact) +
2D Compatibility (PS) -30022 + (NN) -2031 + (LL) 5396
1D Compatibility (HY) -6400 + (ID) 2050
Total energy: -81446.0 ( -42.05 by residue)
QMean score : 0.351
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