Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGEIIDGKKLAKEIQEKVTREVAELVKE--GKQPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEH--ISEEKVIDTISFDKDVDGFHPVNVGNLFIG--KDSFVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAIVIDVGMD-RDENNKLCGDVDFDDVVQEAGFITPVPGGVGPMTITMLLANTLKAAKRIWKMN |
1DIB Chain:A ((4-294)) | -AEILNGKEISAQIRARLKNQVTQLKEQVPGFTPRLAILQVGNRDDSNLYINVKLKAAEEIGIKATHIKLPRTTTESEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKDVDGLTSINAGRLARGDLNDCFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEEVNKGDILVVATGQPEMVKGEWIKPGAIVIDCGINY-----KVVGDVAYDEAKERASFITPVPGGVGPMTVAMLMQSTVESAKRF---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DIB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177115 for 2439 contacts (-72.6/contact) +
2D Compatibility (PS) -29645 + (NN) -9730 + (LL) 524
1D Compatibility (HY) -27200 + (ID) 6750
Total energy: -249916.0 ( -102.47 by residue)
QMean score : 0.638
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