Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LTVSKDEIMKKATELRDALQQTEEVSFYRLAEERINANSKVAAKVSKIKLLQKEAVNLEHYQKLEAMKQTENQIDNVRADIDSLPIVTEFRRAQEDANDLLQSITTEITTKVTTELEKEN
1I2C Chain:A ((294-354))
----------KAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLME-------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1I2C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8461 for 232 contacts (36.5/contact) +
2D Compatibility (PS) -5903 + (NN) 5066 + (LL) 4704
1D Compatibility (HY) -400 + (ID) 1000
Total energy: 10928.0 ( 47.10 by residue)
QMean score : 0.256
(partial model without unconserved sides chains):
PDB file :
Tito_1I2C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I2C-query.scw
PDB file :
Tito_Scwrl_1I2C.pdb
: