Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTVNNVGLRYGDKKLFEDVSIKFLPGNCYGLIGANGAGKSTFLKVLSGEL--------DSQSGNVHIGSGERLAVLRQDHFQYDDELVLNTVIMGHERLYKIMDEKNAIYMKEDFSDEDGIRAAELEGEFAELDGWEAESDAAVLLNGLGIPTDLHGKLMKDLTGGEKVKVLLAQALFGKPDILLLDEPTNHLDIRA---IHWLEEFLINFDNTVIVVSHDRHFLNKVCTHIADLDFSKIKLYV-----GNYDFWYESSQLAQTMMGDRNKKKEEKMKELQDFIARFSANASKSKQATSRKKMLEKITLEDIQPSSRRYP-----FIQFKPDREVGNDLLTVTNLSKTIDGVKILDNLSFSINRNDKVALVGDDEVAKTVLFQILAGEMEPDEGSYKWGITTSQSYFPKDNSEFFEENDMSLVEWLRQFSPEDDSEAFLRGFLGRMLFSGDEVLKKVRVLSGGEKVRCMLSKMMLSGSNVLLLDEPTNHLDLESITALNNG----LEAFKGAIIFASHDHQLLQTIATRIINLSKDQFYNKEISYDEYLKEVMNVAE |
| 3J15 Chain:B ((103-529)) | --------------------------GMVVGIVGPNGTGKTTAVKILAGQLIPNLCEDNDSWDNVIRAFRGNEL----QNYFE------------------RLKNGEIRPVVKPQYVD---LLPKAVKGKVRELLKKVDEVGKFEEVVKELELENVLDRELHQLSGGELQRVAIAAALLRKAHFYFFDEPSSYLDIRQRLKVARVIRRLANEGKAVLVVEHD----------LAVLDYLSDVIHVVYGEPGVYGIFSKPK-------GTRNGINEFLQGYLKDENVRFRPYEIRFTKLSERVDVERETLVE--------YPRLVKDYGSFKLEVEPG------------------------EIRKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKVEWDLTV--AYKPQ---YIKAEYEGTVYELLSKIDSSKLNSNFYKTELLKPLGIIDLYDRNVEDLSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLI-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J15.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66540 for 3086 contacts (-21.6/contact) +
2D Compatibility (PS) -43466 + (NN) -21036 + (LL) 8988
1D Compatibility (HY) -23200 + (ID) 5700
Total energy: -150954.0 ( -48.92 by residue)
QMean score : 0.311
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