Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LTKLKKVMISVIAATLLLLAGCGSSAVIKTDAGSVTQDELYEAMKTTYGNEVVQQLTFKKILEDKYTVTEKEVNAEYKKYEEQYGDSFESTLSSNNLTKTSFKENLEYNLLVQKATEANMDVSESKLKAYYKTWEPDITVRHILVDDEAT--AKEIQTKL-KNGEKFTDLAKEYSTDTATSTNGGLLDPFGPGEMDETFEKAAYALENKDDVSGIVKSTYGYHLIQLVKKTEKGTYAKEKANVKAAYIKSQLTSENMTAALKKELKAANIDIKDSDLKDAFADYTSTSSTSSTTTSN |
| 2JZV Chain:A ((161-242)) | -----------------------------------------------------------------------------------------------------------------------------------------------LDDKEAKQKAEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDKDFEKALFKLKD-GEVSEVVKSSFGYHIIK----------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JZV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13977 for 469 contacts (-29.8/contact) +
2D Compatibility (PS) -8589 + (NN) -5552 + (LL) 16020
1D Compatibility (HY) -5200 + (ID) 1700
Total energy: -18998.0 ( -40.51 by residue)
QMean score : 0.673
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