Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRLGSHVSMSGKKMLLGASEEAASYGSNTFMIYTGAPQNTRRKPIEELNIE---AGLEHMKAHDMADIVVHAPYIINIGNSVKPETFELGVNFLQSEIERTRALGAKQIVLHPGAHVGEGADK-GIKQIIQGLNEALIHDQDVQIALETMAGKGSECGRTFEELAQIIDGVTHNELLSVTFDTCHTHDAGYDIVN--DFDGVLNQFDKIVGIDRLKVLHINDSKNERGAHKDRHANIGFGHIGFDALHYIVHHPQLADVPKILETPYVGGDKASKKAPYKWEIAMLKNGEFDPDLLNKIQNS |
| 2NQJ Chain:A ((1-262)) | MKYIGAHVSAAGG--LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH-YTSAQILPHDSYLINLGHPVT-EALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILQT------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NQJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119810 for 2209 contacts (-54.2/contact) +
2D Compatibility (PS) -27307 + (NN) -10470 + (LL) 1768
1D Compatibility (HY) -16000 + (ID) 4400
Total energy: -176219.0 ( -79.77 by residue)
QMean score : 0.467
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