Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LTLLDKLNEDMKQAMRDKEKEKLSVIRMLKAALQNEAIHQGVKDLTPDDEVTVISREL------KQRRDSLAEFDKAGRSDLSDKVRSEIVIVEDYAPKQLT-PEELENIVKATIEEVGA------S-SKADFGKVMSAIMPKVKGKADGGAVNQFVKKYLS
3AL0 Chain:B ((351-480))
------------------------IMTEVLRELNERNIEITESKLTPQHFADLFKLMDEGKISIKIAKEIFPEVFETGK--------MPSQIVEEKGLTQINDEKLIEELVKKAMEQNPKAVQDYKSGKKKAAGFFVGYVMRETKGKANPELTNRIIQKLLE
General information:
TITO was launched using:
RESULT:
Template:
3AL0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12205 for 738 contacts (-16.5/contact) +
2D Compatibility (PS) -12221 + (NN) -5671 + (LL) 2332
1D Compatibility (HY) -5600 + (ID) 1350
Total energy: -34715.0 ( -47.04 by residue)
QMean score : 0.459
(partial model without unconserved sides chains):
PDB file :
Tito_3AL0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AL0-query.scw
PDB file :
Tito_Scwrl_3AL0.pdb
: