Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKHKVGILGGTFDPPHLAHLHMAEEAKKQLELEKILFLPNKIPPHKHISGMASINERVEMLQLMIEGIDSFEIDTRELMRTGKSYTYDTMRDMIIEQPDTDFYFIIGGDMVEYLPKWYHIDDLVKMVTFVGVNRPLYQPEVPYDVVKIDMPKTTISSTEIR---NDIEHAEAFLPEKVWSYIKEHQLYGKK
2QTN Chain:A ((3-187))
---KIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQGRDITSVESRLQMLELATEAEEHFSICLEELSRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPYPITTVEIPEFAVSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLY---
General information:
TITO was launched using:
RESULT:
Template:
2QTN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -127116 for 1361 contacts (-93.4/contact) +
2D Compatibility (PS) -19558 + (NN) -8379 + (LL) 272
1D Compatibility (HY) -18400 + (ID) 4500
Total energy: -177681.0 ( -130.55 by residue)
QMean score : 0.501
(partial model without unconserved sides chains):
PDB file :
Tito_2QTN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QTN-query.scw
PDB file :
Tito_Scwrl_2QTN.pdb
: