Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKITTKGRYGLTITLELAKRIGDGPISLRSIAQDKNLSEHYLEQLIGPLRNAGIVKSIRGAHGGYVLNGDPEKITAGDIIRTLEGPIVLVESMEDEEAAQRELWTRMRNAVRDVLDQTTLADLLKHSTDSELTDGYMFYI
4HF2 Chain:A ((1-132))
MRLTSKGRYAVTAMLDVALNSEAGPVPLADISERQGISLSYLAQLFSRLRKNGLVSSVRGPGGGYLLGKDASSIAVGEVISAVDES-----------ALTHALWRDLSDRLTGFLNNITLGELVNN--------------
General information:
TITO was launched using:
RESULT:
Template:
4HF2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65110 for 815 contacts (-79.9/contact) +
2D Compatibility (PS) -12348 + (NN) -4434 + (LL) 2016
1D Compatibility (HY) -12800 + (ID) 2000
Total energy: -94676.0 ( -116.17 by residue)
QMean score : 0.641
(partial model without unconserved sides chains):
PDB file :
Tito_4HF2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HF2-query.scw
PDB file :
Tito_Scwrl_4HF2.pdb
: