Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIKDLQDYVAIVNDWPKKGIVFKDITPLMNDGEAYRFATDKIVEYAKEL---KIDIIVGPEARGFIIGCPVAYALGIGFAPVRKPGKLPRETIEMEYDLEYGTNKLSMHSDAIKPGQRVLITDDLLATGGTIEATIKLVEELGGIVAGCAFLIELKELEGHKKLNGYDRLILMKL
1ZN9 Chain:A ((5-168))
-ELQLVEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIAGLDSRGFLFGPSLAQELGLGCVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSLKGREKL-----------
General information:
TITO was launched using:
RESULT:
Template:
1ZN9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116084 for 1235 contacts (-94.0/contact) +
2D Compatibility (PS) -16850 + (NN) 675 + (LL) 1076
1D Compatibility (HY) -14800 + (ID) 3300
Total energy: -149283.0 ( -120.88 by residue)
QMean score : 0.480
(partial model without unconserved sides chains):
PDB file :
Tito_1ZN9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZN9-query.scw
PDB file :
Tito_Scwrl_1ZN9.pdb
: