Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGEAIVITSGKGGVGKTTSTANLGTALALQGKKVCLIDMDIGLRNLDVVLGLENRIIYDLVDVVEGRCKIHQAMIKDKRFDDLLFLLPAAQTTDKNAVSGEQMVDLINQLRPDYDFILIDCPAGIETGYKNAVAGADKAIVVTTPEISAVRDADRIIGLLEKEDIEPPKLIINRI-RTQMMMNGDVMDIDEITTHLSIELLGIIIDDDEVIRSSNSGDP-VAMLPNNRASQGYRNIARRILGESIPLMSIETKKAGFFARLKQLFSGK
1G3R Chain:A ((1-233))
MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLTMANLSLVLGVDDPDVT-LHDVLAGEANVEDA-IYMTQFDNVYVLPGAVDWEHVLKADPRKLPEVIKSLKDKFDFILIDCPAGLQLDAMSAMLSGEEALLVTNPEISCLTDTMKVGIVLKKAGLAILGFVLNRYGRSDRDIPPEAAE-----DVMEVPLLAVIPEDPAIREGTLEGIPAVKYKPESKGAKAFVKLAEEI----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1G3R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -168389 for 2114 contacts (-79.7/contact) +
2D Compatibility (PS) -24172 + (NN) -3048 + (LL) 2620
1D Compatibility (HY) -17200 + (ID) 3750
Total energy: -213939.0 ( -101.20 by residue)
QMean score : 0.491
(partial model without unconserved sides chains):
PDB file :
Tito_1G3R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G3R-query.scw
PDB file :
Tito_Scwrl_1G3R.pdb
: