Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNQFDRHRRLRKTKTMRDLVRETVLHTDDLIYPIFVKDGKEPKTEVVSMPGVFQYPLHELEEEMRVVESLGIKAVILFGI-PAEKDAV-GTQAYHDHGIIQEATRLIKKSFPKILVVADTCLCEFTDHGHCGVIEN-GEILNDESLELLKQTAVSQAAAGADIIAPSNMMDGFVQVIREGLDEAGFYDIPIMSYAVKYASAFYGPFRDAAGSAPQF--GDRKSYQMDPANREEALREAKSDEQEGADFLIVKPSLSYLDIMRDVKNNTNLPVVAYNVSGEYAMVKAAAQNGWIDEEKIVIEMLTSMKRAGATLIITYFAKDVSKYLNK
1W5O Chain:A ((12-335))----YTRLRRNRRDDFSRRLVRENVLTVDDLILPVFVLDGVNQRESIPSMPGVERLSIDQLLIEAEEWVALGIPALALFPVTPVEKKSLDAAEAYNPEGIAQRATRALRERFPELGIITDVCLCPFTTHGQCGILDDDGYVLNDVSIDVLVRQALSHAEAGAQVVAPSDMMDGRIGAIREALESAGHTNVRVMAYSAKYASAYYGPFRDAVGSASNLGKGNKATYQMDPANSDEALHEVAADLAEGADMVMVKPGMPYLDIVRRVKDEFRAPTFVYQVSGEYAMHMGAIQNGWL-AESVILESLTAFKRAGADGILTYFAKQAAEQLRR


General information:
TITO was launched using:
RESULT:

Template: 1W5O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -202986 for 2782 contacts (-73.0/contact) +
2D Compatibility (PS) -35424 + (NN) -17620 + (LL) 236
1D Compatibility (HY) -27600 + (ID) 7750
Total energy: -291144.0 ( -104.65 by residue)
QMean score : 0.611

(partial model without unconserved sides chains):
PDB file : Tito_1W5O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1W5O-query.scw
PDB file : Tito_Scwrl_1W5O.pdb: