Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRKIIVGSRRSKLALTQSNWVINKLKENYPEFDFEIKEIVTKGDRILDVTLSKVGGKGLFVSEVEQALSDEAIDFAVHSMKDVPSSLKEGLIIGAIPKRESPLDCFVFNQV---NSLDELPQGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKL-HAENFDAIILAKAGLARMGWLENTTLKLEDIPPEVCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLKKLNGGCEIPIAGFATRANEFVQFKGLVGNADGSIILESEQVGANPSEIGNKVAEDLLSEGADTIIKELRNV |
3ECR Chain:A ((22-291)) | --RVIRVGTRKSQLARIQTDSVVATLKASYPGLQFEIIAM-------------------LFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGWHNRVGQILH---PEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE--CSVPVAVHTAMKDGQLYLTGGVWSLDGS-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ECR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104051 for 1930 contacts (-53.9/contact) +
2D Compatibility (PS) -26794 + (NN) -15173 + (LL) 3200
1D Compatibility (HY) -20000 + (ID) 5800
Total energy: -168618.0 ( -87.37 by residue)
QMean score : 0.548
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