Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVSIIGATGYGGLELIRLLHQHSSVDIATLHSFSAQA----ETLATFYPHLKDLAVSPLEKINP-TEIIEKSDTVFIATPSGIAKDIALPYVDAGLNVIDLSGDFRLKDRQLYEKWYGKSAAPTEYIGKAEYGLAEF--REKKETTFIANPGCYATATLLGLAPLATNKLIDPTSI-IVDAKSGISGAGKVPSASTHFTETNENMTLYKMNSHQHIPEIMQQLTKWDESIPAIQFSTSLIPITRGIFTTIYVKPKNPITQKELHKLYESTYDNAPFVRIQPENVYPTVKQVTASNYCDIGLAYNEKTNVITIVSVIDNLVKGAAGQAIQNLNIMANFAESDGLRFIPVYP |
| 3DR3 Chain:A ((9-336)) | ----IVGASGYAGAELVTYVNRHPHMNITAL-TVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLATAHEVSHDLAPQFLEAGCVVFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLAEWCGNKLKEANLIAVPGCYPTAAQLALKPLIDADLLDLNQWPVINATSGVSGAGRKAAISNSFCEV--SLQPYGVFTHRHQPEIATHLGA------DVIFTPHLGNFPRGILETITCRLKSGVTQAQVAQALQQAYAHKPLVRLYDKGV-PALKNVVGLPFCDIGFAVQGEH--LIIVATEDNLLKGAAAQAVQCANIRFGYAETQSL------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DR3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193248 for 2787 contacts (-69.3/contact) +
2D Compatibility (PS) -34247 + (NN) -11292 + (LL) 1368
1D Compatibility (HY) -29600 + (ID) 6100
Total energy: -273119.0 ( -98.00 by residue)
QMean score : 0.452
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