Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VIPAKLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIGGFNSNQLLPYLDYDLISENPKILCGFSDITALATAIYTQTELITYSG-AHFSSFS-MEKGLDYVMESFSDCLLQKE--PFALKESATWSDD--EWYLDQENRNFIPNEGLVVMQPGVAEGIIIGGNLCTLNLLQGTEYMPNLA-GTILFIED---DFMTIPETFDRDLESLLSQPGA-DEIEGMVIGRFQQKTAMTAEKLAY-IIETKTALQKIPVISGADFGHTQPIATFPIGGTARID-TNQTDKIQIIRH |
| 4JVO Chain:A ((6-330)) | -LPKSLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIGGMNSNSLLPYIDYDAFQNNPKIMIGYADATALLLGIYAKTGIPTFYGPALVPSFGEFEPFVDDTYKYFLETLLHDQALPYNIKQPLFWSDEFINWEEKTKEKELRPNNWISVTN-GQATGRVIGGNLNTIQGIWGSPYMPCIQEGDILFIEDSSKDAATIERSF-----SFLKINGVFDKVSGIILGKHEQFDDCGTNRKPYEILLEVLQNQRIPLLADFDCCATHPMITMPIGVQVKMDATNKTIHI----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JVO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -189191 for 2708 contacts (-69.9/contact) +
2D Compatibility (PS) -32528 + (NN) -6532 + (LL) 952
1D Compatibility (HY) -22400 + (ID) 5700
Total energy: -255399.0 ( -94.31 by residue)
QMean score : 0.489
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