Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKILIGGIRLYQKYISRFTPATCRFYPTCSAYGIEAIQTHGALKGSYLAIRRISKCHPFHKGGLDFVPPKKDKNADSEHSCKVHHHH
2NX6 Chain:A ((4-13))
----------------------SCPQFPSCSP--------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2NX6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1588 for 26 contacts (-61.1/contact) +
2D Compatibility (PS) -1021 + (NN) -966 + (LL) 4432
1D Compatibility (HY) -800 + (ID) 200
Total energy: -143.0 ( -5.50 by residue)
QMean score : 0.211
(partial model without unconserved sides chains):
PDB file :
Tito_2NX6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2NX6-query.scw
PDB file :
Tito_Scwrl_2NX6.pdb
: