Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKVALVTGSSRGLGREIAIALAKEGYDI-AVNFSRNRKKAEEVQQEIEQLGRKCVIFKANVGDVEKVRELFKAVDEEFGRLDIFINNAASGVLR--PLMELEESHWDWTMNINAKALLFAGQEAAK-LMQRHQSGKIISLSSI----GSIRYLENYTTVGVSKAAVESLTRYLAVELAPFGIAVNAVSGGLIETDALNHFPNREELLKDAVSKTPAGRMIEPNDLVNAVLFLASEKADMIRGQTILVDGGRTLLV
4ZA2 Chain:A ((11-249))
--KVALITGCDTGLGQGMAIGLAQAGCDIVGVNIVEPKDTIEKVTA----LGRRFLSLTADMSNVSGHAELVEKAVAEFGHVDILVNNA--GIIRREDAIEFSEKNWDDVMNLNIKSVFFMSQTVARQFIKQGKGGKIINIASMLSFQGGIR-VPSYTA---SKSAVMGVTRLMANEWAKHGINVNAIAPGYMATNNTQQLRADEERSKEILDRIPAGRWGLPQDLMGPSVFLASSASDYINGYTIAVDGG-----
General information:
TITO was launched using:
RESULT:
Template:
4ZA2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106526 for 1905 contacts (-55.9/contact) +
2D Compatibility (PS) -25473 + (NN) -13455 + (LL) 1776
1D Compatibility (HY) -21200 + (ID) 4850
Total energy: -169728.0 ( -89.10 by residue)
QMean score : 0.610
(partial model without unconserved sides chains):
PDB file :
Tito_4ZA2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZA2-query.scw
PDB file :
Tito_Scwrl_4ZA2.pdb
: