Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIENELEHAKKTEKIEFGVNRRLIFSSCLLWMAVGLLLYVVFSHIKGVNGIEEMILLVFIGLCVLRPLFRLINIAPTVELTERGVAYRGDFKSWNEIKKTELKKPAMMLFSQGRLIIMTSINGREEVAWDIVAADVSISLEELEKLIQSMRSTYTDDETIGMEIFVEKK |
1LVA Chain:A ((15-40)) | ---------------------------------------------------------------------------------------------------------------------------REGLDWQEAATRASLSLEETRKLLQS-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LVA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11075 for 122 contacts (-90.8/contact) +
2D Compatibility (PS) -2774 + (NN) -728 + (LL) 12652
1D Compatibility (HY) -800 + (ID) 650
Total energy: -3375.0 ( -27.66 by residue)
QMean score : 0.482
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