Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKHLFKLDPAKNLPTNDVTKLIHSGTDGFIIGGTDNVQIEAVQNLYELLVETDLPIFLEISNESMILPEADHFLIPVVLNTENSKWTHGLHKELIKEMGEFIPWKRVTSEGYVILNKDAKVAHLTEAKTDLTDEDIVAYARLAENIFHLPIFYVEYSGMYGDPEVVRKASAALSNTKFWYGGGIRSKEQAAEMAKYADTIIVGNIIYEDLEKALETATIFRKKTV
3W02 Chain:A ((13-230))
-RHIFKLDPAKHISDDDLDAICMSQTDAIMIGGTDDVTEDNVIHLMSKIRRYPLPLVLEISNIESVMPGFDFYFVPTVLNSTDVAFHNGTLLEALKTYGHSIDFEEVIFEGYVVCNADSKVAKHTKANTDLTTEDLEAYAQMVNHMYRLPVMYIEYSGIYGDVSKVQAVSEHLTETQLFYGGGISSEQQATEMAAIADTIIVGDIIYKDIKKALKTVKI------
General information:
TITO was launched using:
RESULT:
Template:
3W02.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -144897 for 1830 contacts (-79.2/contact) +
2D Compatibility (PS) -23879 + (NN) -11370 + (LL) 812
1D Compatibility (HY) -23200 + (ID) 5000
Total energy: -207534.0 ( -113.41 by residue)
QMean score : 0.634
(partial model without unconserved sides chains):
PDB file :
Tito_3W02.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W02-query.scw
PDB file :
Tito_Scwrl_3W02.pdb
: