Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLERYTRKEMGNIWTEQNRYQAWLEVEILACEAWAELGDIPKEDVAKIRANA---KFDVDRIHEIELETRHDVVAFTRSVSESLG-----AERKWVHYGLTSTDVVDTANSYLLKQANEILRKDLENFIAIIGEKAKEHKYTVTMGRTHGVHAEPTTFGLKLALWYEEMKRNLERFNFAADGV---EFGKISGAVGTYANIDPFVETYVCEKLGTTPAPISTQTLQRDRHAEYLATLALIATSVEKFAVEVRALQKSEVREVEEFFAKGQKGSSAMPHKRNPIGSENVTGLARVIRGHMVTAYENVPLWHERDISHSSAERIILPDSTILLDYILNRFGNIVKNLTVFPENMKRNMDRTLGLIYSQRVLLALIDKGLAREAAYDVVQPRAMEAWEKQVPFRELVEQDATITENLSAEEIADCFDYNYHLKNVDLIFDRLGL |
| 1RE5 Chain:A ((10-431)) | ----FTAPAMREIFSDRGRLQGMLDFEAALARAEASAGLVPHSAVAAIEAACQAERYDTGALANAIATAGNSAIPLVKALGKVIATGVPEAER-YVHLGATSQDAMDTGLVLQLRDALDLIEADLGKLADTLSQQALKHADTPLVGRTWLQHATPVTLGMKLAGVLGALTRHRQRLQELRPRLLVLQFGGASGSLAALGSKAMPVAEALAEQLKLT-LPEQPWHTQRDRLVEFASVLGLVAGSLGKFGRDISLLMQTEAGEVFEPSAP----------KRNPVGAAVLIGAATRVPGLLSTLFAAMPQEHERSLGLWHAEWETLPDICCLVSGALRQAQVIAEGMEVDAARMRRNLDLTQGLVLAEAVSIVLAQR-LGRDRAHHLLEQCCQRAVAEQRHLRAVLGDEPQVSAELSGEELDRLLDPAHYL------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RE5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156961 for 3254 contacts (-48.2/contact) +
2D Compatibility (PS) -42733 + (NN) -13126 + (LL) 1196
1D Compatibility (HY) -14400 + (ID) 5800
Total energy: -231824.0 ( -71.24 by residue)
QMean score : 0.469
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