Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKLISWNVNGLRAAVKKGFLEYFEEVDADIFCLQETKLQEGQIELDL---PAYK-DYWNYAVKKGYSGTAIFTKVEPLSVQYGLGIPEHDTEGRVITLEFEEFFMVTVYTPNSQAELKRLDYRMTFEDAILEYVKNLDNTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSAFLDA-GFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIHADVLGSDHCPVELELNL |
| 2O3H Chain:A ((29-285)) | LKIASWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYWSAPS-EGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O3H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139959 for 2109 contacts (-66.4/contact) +
2D Compatibility (PS) -27060 + (NN) -8940 + (LL) 64
1D Compatibility (HY) -25200 + (ID) 6400
Total energy: -207495.0 ( -98.39 by residue)
QMean score : 0.518
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