Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEVLEKVTKIIVDRLGVEESKVTLEASFKEDLGADSLDVVELVMELEDEFGVEISDGDAENINTVGDAVKYIEANA
3GZM Chain:A ((3-78))
LKSTFDDIKKIISKQLSVEEDKIQMNSNFTKDLGADSLDLVELIMALEEKFNVTISDQDALKINTVQDAIDYIEKN-
General information:
TITO was launched using:
RESULT:
Template:
3GZM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42099 for 511 contacts (-82.4/contact) +
2D Compatibility (PS) -7974 + (NN) -1602 + (LL) 144
1D Compatibility (HY) -9600 + (ID) 2000
Total energy: -63131.0 ( -123.54 by residue)
QMean score : 0.832
(partial model without unconserved sides chains):
PDB file :
Tito_3GZM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GZM-query.scw
PDB file :
Tito_Scwrl_3GZM.pdb
: