Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKIAFVFPGQGAQKVGMGQDVAAEYPEAKKIYDDADERLGFSITEIITEGPIELLTKSENAQPALVSTSVAILRALETYGVKAD-YVAGHSLGEYSALVAGGFLEASDAIYLVRKRGELMEAAVPNGAGAMAAVLGVDRETLKTITEEVTKEGDAVQLANLNCPGQIVISGTTAGVEKAGEKAKESGAKRVLPLAVSGPFHSSLMEPAALAFRDVLAEVKISDGQIPVVNNVDAKETTDKSEISDKLIKQIYSPVLWEDIVEELIKNGVDTFVEIGSGKVLAGLIKKINRDVTVLSAGDAESVKSVAATLKGE |
| 2G2Y Chain:A ((2-306)) | --QFAFVFPGQGSQTVGMLADMAASYPIVEETFAEASAALGYDLWALTQQGPAEELNKTWQTQPALLTASVALYRVWQQQGGKAPAMMAGHSLGEYSALVCAGVIDFADAVRLVEMRGKFMQEAVPEGTGAMAAIIGLDDASIAKACEEAA-EGQVVSPVNFNSPGQVVIAGHKEAVERAGAACKAAGAKRALPLPVSVPSHCALMKPAADKLAVELAKITFNAPTVPVVNNVDVKCETNGDAIRDALVRQLYNPVQWTKSVEYMAAQGVEHLYEVGPGKVLTGLTKRI---VDTLTASALNEPSAMAAAL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2G2Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181562 for 2807 contacts (-64.7/contact) +
2D Compatibility (PS) -32920 + (NN) -8513 + (LL) 264
1D Compatibility (HY) -23200 + (ID) 7000
Total energy: -252931.0 ( -90.11 by residue)
QMean score : 0.606
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