Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKQVVVMDEAAIKRALTRVSYEIIERNKGTKNLALVGIKTRGIYLAERLHKRILEIEGIDVPVGDIDITLYRDDLSFKDDKTREPAVHGTNIPFDINGKKVVLVDDVLYTGRTVRAAMDALMDVGRPAQIHLAVLADRGHRELPIRADYVGKNIPTSGNERVEVRLTDVDHAEDAVIINKNE
1XZ8 Chain:A ((1-169))
MQK-AVVMDEQAIRRALTRIAHEIIERNKGIDGCVLVGIKTRGIYLARRLAERIEQIEGASVPVGELDITLYRD------------------VPFPVTERNVILVDDVLFTGRTVRAAMDAVMDLGRPARIQLAVLVDRGHRELPIRADFVGKNVPTSRSELIVVELSEVD------------
General information:
TITO was launched using:
RESULT:
Template:
1XZ8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101714 for 1169 contacts (-87.0/contact) +
2D Compatibility (PS) -16736 + (NN) -6302 + (LL) 1564
1D Compatibility (HY) -19600 + (ID) 5400
Total energy: -148188.0 ( -126.76 by residue)
QMean score : 0.606
(partial model without unconserved sides chains):
PDB file :
Tito_1XZ8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XZ8-query.scw
PDB file :
Tito_Scwrl_1XZ8.pdb
: